Pseudomonas protegens Pf-5, PFL_2007

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_2007
Name
Replicon chromosome
Genomic location 2230550 - 2231776 (+ strand)

Cross-References

RefSeq YP_259126.1
GI 70729388
Entrez 3476436
INSDC AAY91293.1
NCBI Locus Tag PFL_2007
UniParc UPI000054D30B
UniProtKB Acc Q4KF57
UniProtKB ID Q4KF57_PSEF5
UniRef100 UniRef100_Q4KF57
UniRef50 UniRef50_Q4KF57
UniRef90 UniRef90_Q4KF57

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -6.79
Kyte-Doolittle Hydrophobicity Value 0.000
Molecular Weight (kDa) 42748.9
Isoelectric Point (pI) 4.69

Subcellular localization

Individual Mappings
Localization Confidence PMID
Extracellular Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 63 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000603 (334 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_2007

Human Homologs

References

No references are associated with this feature.