Pseudomonas protegens Pf-5, PFL_2107 (rihA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_2107
Name
rihA
Replicon chromosome
Genomic location 2327429 - 2328457 (+ strand)

Cross-References

RefSeq YP_259215.1
GI 70729477
EC Number 3.2.2.8
Entrez 3478919
INSDC AAY91382.1
NCBI Locus Tag PFL_2107
UniParc UPI000054D363
UniProtKB Acc Q4KEW8
UniProtKB ID Q4KEW8_PSEF5
UniRef100 UniRef100_Q4KEW8
UniRef50 UniRef50_Q9I6Y9
UniRef90 UniRef90_Q4KEW8

Product

Feature Type CDS
Coding Frame 1
Product Name
pyrimidine-specific ribonucleoside hydrolase RihA
Synonyms
Evidence for Translation
Charge (pH 7) -1.83
Kyte-Doolittle Hydrophobicity Value -0.023
Molecular Weight (kDa) 37.3
Isoelectric Point (pI) 6.61

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 242 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000141 (486 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_2107
Search term: rihA

References

No references are associated with this feature.