Pseudomonas protegens Pf-5, PFL_2188

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_2188
Name
Replicon chromosome
Genomic location 2443416 - 2443847 (- strand)

Cross-References

RefSeq YP_259295.1
GI 70729557
Entrez 3478395
INSDC AAY91462.1
NCBI Locus Tag PFL_2188
UniParc UPI000054D3AD
UniProtKB Acc Q4KEN8
UniProtKB ID Q4KEN8_PSEF5
UniRef100 UniRef100_Q4KEN8
UniRef50 UniRef50_E9A5G1
UniRef90 UniRef90_Q4KEN8

Product

Feature Type CDS
Coding Frame 1
Product Name
alkylhydroperoxidase
Synonyms
Evidence for Translation
Charge (pH 7) -2.41
Kyte-Doolittle Hydrophobicity Value 0.208
Molecular Weight (kDa) 15.7
Isoelectric Point (pI) 5.64

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 205 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG020026 (35 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_2188

Human Homologs

References

No references are associated with this feature.