Pseudomonas protegens Pf-5, PFL_2508

Gene Feature Overview

Strain	Pseudomonas protegens Pf-5 GCF_000012265.1|latest
Locus Tag	PFL_2508
Name
Replicon	chromosome
Genomic location	2773780 - 2774778 (+ strand)

Cross-References

RefSeq	YP_259615.1
GI	70729876
Entrez	3478888
INSDC	AAY91781.1
NCBI Locus Tag	PFL_2508
UniParc	UPI000054D4ED
UniProtKB Acc	Q4KDR8
UniProtKB ID	Q4KDR8_PSEF5
UniRef100	UniRef100_Q4KDR8
UniRef50	UniRef50_Q4KDR8
UniRef90	UniRef90_Q4KDR8

Product

Feature Type	CDS
Coding Frame	1
Product Name	cation efflux protein
Synonyms
Evidence for Translation
Charge (pH 7)	0.45
Kyte-Doolittle Hydrophobicity Value	0.238
Molecular Weight (kDa)	34932.3
Isoelectric Point (pI)	7.03

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 380 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000388 (818 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFL_2508 Search term: cation efflux protein

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000355968 solute carrier family 30 member 1 [Source:HGNC Symbol;Acc:HGNC:11012] E-value: 5.6e-07 Percent Identity: 33.1

References