Pseudomonas protegens Pf-5, PFL_2651

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_2651
Name
Replicon chromosome
Genomic location 2932478 - 2933290 (+ strand)

Cross-References

RefSeq YP_259758.1
GI 70730019
Entrez 3476579
INSDC AAY91924.1
NCBI Locus Tag PFL_2651
UniParc UPI000054D57A
UniProtKB Acc Q4KDC5
UniProtKB ID Q4KDC5_PSEF5
UniRef100 UniRef100_Q4KDC5
UniRef50 UniRef50_Q2KX55
UniRef90 UniRef90_Q4KDC5

Product

Feature Type CDS
Coding Frame 1
Product Name
HpcH/HpaI aldolase/citrate lyase
Synonyms
Evidence for Translation
Charge (pH 7) -1.17
Kyte-Doolittle Hydrophobicity Value 0.336
Molecular Weight (kDa) 28.2
Isoelectric Point (pI) 6.72

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 281 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000850 (424 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_2651

Human Homologs

References

No references are associated with this feature.