Pseudomonas protegens Pf-5, PFL_2659

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_2659
Name
Replicon chromosome
Genomic location 2939775 - 2940407 (+ strand)

Cross-References

RefSeq YP_259766.1
GI 70730027
Entrez 3476587
INSDC AAY91932.1
NCBI Locus Tag PFL_2659
UniParc UPI000054D582
UniProtKB Acc Q4KDB7
UniProtKB ID Q4KDB7_PSEF5
UniRef100 UniRef100_Q4KDB7
UniRef50 UniRef50_C1DIC7
UniRef90 UniRef90_Q4KDB7

Product

Feature Type CDS
Coding Frame 1
Product Name
TRAP dicarboxylate transporter subunit DctQ
Synonyms
Evidence for Translation
Charge (pH 7) 1.34
Kyte-Doolittle Hydrophobicity Value 0.688
Molecular Weight (kDa) 23.4
Isoelectric Point (pI) 7.60

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 67 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000852 (716 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_2659

Human Homologs

References

No references are associated with this feature.