Pseudomonas protegens Pf-5, PFL_2917

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_2917
Name
Replicon chromosome
Genomic location 3262867 - 3264120 (- strand)

Cross-References

RefSeq YP_260023.1
GI 70730284
Entrez 3477910
INSDC AAY92189.1
NCBI Locus Tag PFL_2917
UniParc UPI000054D672
UniProtKB Acc Q4KCL0
UniProtKB ID Q4KCL0_PSEF5
UniRef100 UniRef100_Q4KCL0
UniRef50 UniRef50_A7HP83
UniRef90 UniRef90_Q4KCL0

Product

Feature Type CDS
Coding Frame 1
Product Name
oxidoreductase membrane protein
Synonyms
Evidence for Translation
Charge (pH 7) 13.97
Kyte-Doolittle Hydrophobicity Value 0.179
Molecular Weight (kDa) 46862.3
Isoelectric Point (pI) 9.69

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 148 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000529 (358 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_2917

Human Homologs

References

No references are associated with this feature.