Pseudomonas protegens Pf-5, PFL_3103 (yliI)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_3103
Name
yliI
Replicon chromosome
Genomic location 3574071 - 3575222 (- strand)

Cross-References

RefSeq YP_260209.1
GI 70730468
EC Number 1.1.5.-
Entrez 3477274
INSDC AAY92373.1
NCBI Locus Tag PFL_3103
UniParc UPI000054D726
UniProtKB Acc Q4KC24
UniProtKB ID Q4KC24_PSEF5
UniRef100 UniRef100_Q4KC24
UniRef50 UniRef50_W8XQ52
UniRef90 UniRef90_Q4KC24

Product

Feature Type CDS
Coding Frame 1
Product Name
aldose sugar dehydrogenase YliI
Synonyms
Evidence for Translation
Charge (pH 7) -2.86
Kyte-Doolittle Hydrophobicity Value -0.371
Molecular Weight (kDa) 41564.6
Isoelectric Point (pI) 6.43

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 325 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001072 (523 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_3103
Search term: yliI

Human Homologs

Ensembl 110, assembly GRCh38.p14
HHIP like 1 [Source:HGNC Symbol;Acc:HGNC:19710]
E-value: 1.5e-19
Percent Identity: 29.2
Ensembl 110, assembly GRCh38.p14
HHIP like 1 [Source:HGNC Symbol;Acc:HGNC:19710]
E-value: 1.5e-19
Percent Identity: 29.2

References

No references are associated with this feature.