Pseudomonas protegens Pf-5, PFL_3158

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_3158
Name
Replicon chromosome
Genomic location 3634161 - 3634622 (+ strand)

Cross-References

RefSeq YP_260264.1
GI 70730523
Entrez 3475992
INSDC AAY92428.1
NCBI Locus Tag PFL_3158
UniParc UPI000054D75D
UniProtKB Acc Q4KBW9
UniProtKB ID Q4KBW9_PSEF5
UniRef100 UniRef100_Q4KBW9
UniRef50 UniRef50_Q88KU8
UniRef90 UniRef90_Q4KBW9

Product

Feature Type CDS
Coding Frame 1
Product Name
lipoprotein
Synonyms
Evidence for Translation
Charge (pH 7) 0.20
Kyte-Doolittle Hydrophobicity Value 0.124
Molecular Weight (kDa) 16.6
Isoelectric Point (pI) 7.36

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 32 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000125 (507 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_3158
Search term: lipoprotein

Human Homologs

References

No references are associated with this feature.