Pseudomonas protegens Pf-5, PFL_3523

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_3523
Name
Replicon chromosome
Genomic location 4061409 - 4062899 (- strand)

Cross-References

RefSeq YP_260626.2
GI 346643025
EC Number 1.2.1.-
Entrez 3475342
INSDC AAY92790.2
NCBI Locus Tag PFL_3523
UniParc UPI000219FFB2
UniProtKB Acc Q4KAV7
UniProtKB ID Q4KAV7_PSEF5
UniRef100 UniRef100_Q4KAV7
UniRef50 UniRef50_C9YAW5
UniRef90 UniRef90_Q4KAV7

Product

Feature Type CDS
Coding Frame 1
Product Name
aldehyde dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -10.27
Kyte-Doolittle Hydrophobicity Value 0.038
Molecular Weight (kDa) 53193.0
Isoelectric Point (pI) 5.09

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 608 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000218 (393 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_3523

Human Homologs

Ensembl 110, assembly GRCh38.p14
aldehyde dehydrogenase 1 family member A2 [Source:HGNC Symbol;Acc:HGNC:15472]
E-value: 1.2e-106
Percent Identity: 43.2
Ensembl 110, assembly GRCh38.p14
aldehyde dehydrogenase 1 family member A2 [Source:HGNC Symbol;Acc:HGNC:15472]
E-value: 1.2e-106
Percent Identity: 43.2
Ensembl 110, assembly GRCh38.p14
aldehyde dehydrogenase 1 family member A2 [Source:HGNC Symbol;Acc:HGNC:15472]
E-value: 1.2e-106
Percent Identity: 43.2

References

No references are associated with this feature.