Pseudomonas protegens Pf-5, PFL_3967 (cybB)

Gene Feature Overview

Strain	Pseudomonas protegens Pf-5 GCF_000012265.1|latest
Locus Tag	PFL_3967
Name	cybB
Replicon	chromosome
Genomic location	4580369 - 4580923 (+ strand)

Cross-References

RefSeq	YP_261067.1
GI	70731326
Entrez	3477725
INSDC	AAY93231.1
NCBI Locus Tag	PFL_3967
UniParc	UPI000054DA7D
UniProtKB Acc	Q4K9L6
UniProtKB ID	Q4K9L6_PSEF5
UniRef100	UniRef100_Q4K9L6
UniRef50	UniRef50_Q4K9L6
UniRef90	UniRef90_Q4K9L6

Product

Feature Type	CDS
Coding Frame	1
Product Name	cytochrome b561
Synonyms
Evidence for Translation
Charge (pH 7)	12.11
Kyte-Doolittle Hydrophobicity Value	0.345
Molecular Weight (kDa)	21.1
Isoelectric Point (pI)	10.58

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 180 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000884 (520 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFL_3967 Search term: cybB Search term: cytochrome b561

Human Homologs

References