Pseudomonas protegens Pf-5, PFL_4010

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4010
Name
Replicon chromosome
Genomic location 4625643 - 4626968 (+ strand)

Cross-References

RefSeq YP_261107.1
GI 70731366
EC Number 3.4.-.-
Entrez 3477765
INSDC AAY93271.1
NCBI Locus Tag PFL_4010
UniParc UPI000054DAA3
UniProtKB Acc Q4K9H6
UniProtKB ID Q4K9H6_PSEF5
UniRef100 UniRef100_Q4K9H6
UniRef50 UniRef50_P76403
UniRef90 UniRef90_Q4K9H6

Product

Feature Type CDS
Coding Frame 1
Product Name
protease
Synonyms
Evidence for Translation
Charge (pH 7) -0.53
Kyte-Doolittle Hydrophobicity Value -0.359
Molecular Weight (kDa) 49790.3
Isoelectric Point (pI) 6.93

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 364 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004991 (502 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4010
Search term: protease

Human Homologs

References

No references are associated with this feature.