Pseudomonas protegens Pf-5, PFL_4062

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4062
Name
Replicon chromosome
Genomic location 4677261 - 4678652 (- strand)

Cross-References

RefSeq YP_261159.1
GI 70731418
Entrez 3476363
INSDC AAY93323.1
NCBI Locus Tag PFL_4062
UniParc UPI000054DAD7
UniProtKB Acc Q4K9C4
UniProtKB ID Q4K9C4_PSEF5
UniRef100 UniRef100_Q4K9C4
UniRef50 UniRef50_A0A0A1FGM8
UniRef90 UniRef90_Q4K9C4

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 15.60
Kyte-Doolittle Hydrophobicity Value -0.065
Molecular Weight (kDa) 51774.3
Isoelectric Point (pI) 10.28

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 36 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000426 (334 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4062

Human Homologs

References

No references are associated with this feature.