Pseudomonas protegens Pf-5, PFL_4072

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4072
Name
Replicon chromosome
Genomic location 4697615 - 4698241 (- strand)

Cross-References

RefSeq YP_261169.1
GI 70731428
EC Number 3.-.-.-
Entrez 3476373
INSDC AAY93333.1
NCBI Locus Tag PFL_4072
UniParc UPI000054DAE1
UniProtKB Acc Q4K9B4
UniProtKB ID Q4K9B4_PSEF5
UniRef100 UniRef100_Q4K9B4
UniRef50 UniRef50_Q48N37
UniRef90 UniRef90_Q4K9B4

Product

Feature Type CDS
Coding Frame 1
Product Name
isochorismatase
Synonyms
Evidence for Translation
Charge (pH 7) -4.35
Kyte-Doolittle Hydrophobicity Value -0.065
Molecular Weight (kDa) 23.0
Isoelectric Point (pI) 5.02

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 205 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001159 (872 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4072
Search term: isochorismatase

Human Homologs

References

No references are associated with this feature.