Pseudomonas protegens Pf-5, PFL_4125

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4125
Name
Replicon chromosome
Genomic location 4788149 - 4789738 (- strand)

Cross-References

RefSeq YP_261222.1
GI 70731481
Entrez 3476173
INSDC AAY93386.1
NCBI Locus Tag PFL_4125
UniParc UPI000054DB15
UniProtKB Acc Q4K961
UniProtKB ID Q4K961_PSEF5
UniRef100 UniRef100_Q4K961
UniRef50 UniRef50_Q4K961
UniRef90 UniRef90_Q4K961

Product

Feature Type CDS
Coding Frame 1
Product Name
EmrB/QacA family drug resistance transporter
Synonyms
Evidence for Translation
Charge (pH 7) 8.00
Kyte-Doolittle Hydrophobicity Value 0.757
Molecular Weight (kDa) 56490.2
Isoelectric Point (pI) 9.16

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 480 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001188 (346 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4125

Human Homologs

References

No references are associated with this feature.