Pseudomonas protegens Pf-5, PFL_4315 (mtnA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4315
Name
mtnA
Replicon chromosome
Genomic location 5018206 - 5019282 (- strand)

Cross-References

RefSeq YP_261407.1
GI 70731665
EC Number 5.3.1.23
Entrez 3478438
INSDC AAY93570.1
NCBI Locus Tag PFL_4315
UniParc UPI000054DBCD
UniProtKB Acc Q4K8M6
UniProtKB ID MTNA_PSEF5
UniRef100 UniRef100_Q4K8M6
UniRef50 UniRef50_Q4ZQ92
UniRef90 UniRef90_Q4K8M6

Product

Feature Type CDS
Coding Frame 1
Product Name
methylthioribose-1-phosphate isomerase
Synonyms
Evidence for Translation
Charge (pH 7) -13.15
Kyte-Doolittle Hydrophobicity Value 0.082
Molecular Weight (kDa) 38482.5
Isoelectric Point (pI) 4.78

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 356 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002446 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4315
Search term: mtnA

Human Homologs

Ensembl 110, assembly GRCh38.p14
methylthioribose-1-phosphate isomerase 1 [Source:HGNC Symbol;Acc:HGNC:28469]
E-value: 8.2e-57
Percent Identity: 44.0

References

No references are associated with this feature.