Pseudomonas protegens Pf-5, PFL_4323

Gene Feature Overview

Strain	Pseudomonas protegens Pf-5 GCF_000012265.1|latest
Locus Tag	PFL_4323
Name
Replicon	chromosome
Genomic location	5027849 - 5029669 (- strand)

Cross-References

RefSeq	YP_261415.1
GI	70731673
Entrez	3478446
INSDC	AAY93578.1
NCBI Locus Tag	PFL_4323
UniParc	UPI000054DBD5
UniProtKB Acc	Q4K8L8
UniProtKB ID	Q4K8L8_PSEF5
UniRef100	UniRef100_Q4K8L8
UniRef50	UniRef50_D7I2P8
UniRef90	UniRef90_Q4K8L8

Product

Feature Type	CDS
Coding Frame	1
Product Name	ABC transporter permease/ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7)	4.57
Kyte-Doolittle Hydrophobicity Value	0.206
Molecular Weight (kDa)	66.3
Isoelectric Point (pI)	8.42

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000827 (524 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFL_4323 Search term: ABC transporter permease/ATP-binding protein

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000478255 ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40] E-value: 3.2e-53 Percent Identity: 31.2
Ensembl 110, assembly GRCh38.p14	ENSP00000265724 ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40] E-value: 3.2e-53 Percent Identity: 31.2

References