Pseudomonas protegens Pf-5, PFL_4533 (bdlA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4533
Name
bdlA
Replicon chromosome
Genomic location 5247385 - 5248704 (+ strand)

Cross-References

RefSeq YP_261617.1
GI 70731875
Entrez 3478648
INSDC AAY93780.1
NCBI Locus Tag PFL_4533
UniParc UPI000054DC9D
UniProtKB Acc Q4K816
UniProtKB ID Q4K816_PSEF5
UniRef100 UniRef100_Q4K816
UniRef50 UniRef50_Q48C69
UniRef90 UniRef90_Q4K816

Product

Feature Type CDS
Coding Frame 1
Product Name
biofilm dispersion protein BdlA
Synonyms
Evidence for Translation
Charge (pH 7) -5.39
Kyte-Doolittle Hydrophobicity Value -0.419
Molecular Weight (kDa) 48783.1
Isoelectric Point (pI) 5.74

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 430 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001343 (526 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4533
Search term: bdlA

Human Homologs

References

No references are associated with this feature.