Pseudomonas protegens Pf-5, PFL_4614

Gene Feature Overview

Strain	Pseudomonas protegens Pf-5 GCF_000012265.1|latest
Locus Tag	PFL_4614
Name
Replicon	chromosome
Genomic location	5323140 - 5324300 (- strand)

Cross-References

RefSeq	YP_261698.1
GI	70731956
Entrez	3478729
INSDC	AAY93861.1
NCBI Locus Tag	PFL_4614
UniParc	UPI000054DCEE
UniProtKB Acc	Q4K7T5
UniProtKB ID	Q4K7T5_PSEF5
UniRef100	UniRef100_Q4K7T5
UniRef50	UniRef50_G8PWC9
UniRef90	UniRef90_J3G3G7

Product

Feature Type	CDS
Coding Frame	1
Product Name	sugar ABC transporter ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7)	-1.42
Kyte-Doolittle Hydrophobicity Value	-0.091
Molecular Weight (kDa)	41.8
Isoelectric Point (pI)	6.31

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002429 (526 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFL_4614 Search term: sugar ABC transporter ATP-binding protein

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000444095 ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40] E-value: 3.9e-20 Percent Identity: 31.4
Ensembl 110, assembly GRCh38.p14	ENSP00000265724 ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40] E-value: 3.9e-20 Percent Identity: 31.4
Ensembl 110, assembly GRCh38.p14	ENSP00000478255 ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40] E-value: 3.9e-20 Percent Identity: 31.4

References