Pseudomonas protegens Pf-5, PFL_4708

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4708
Name
Replicon chromosome
Genomic location 5438468 - 5439127 (+ strand)

Cross-References

RefSeq YP_261791.1
GI 70734384
Entrez 3481472
INSDC AAY96289.1
NCBI Locus Tag PFL_4708
UniParc UPI000054DD4B
UniProtKB Acc Q4K7J2
UniProtKB ID Q4K7J2_PSEF5
UniRef100 UniRef100_Q4K7J2
UniRef50 UniRef50_Q4K7J2
UniRef90 UniRef90_Q4K7J2

Product

Feature Type CDS
Coding Frame 1
Product Name
thioredoxin
Synonyms
Evidence for Translation
Charge (pH 7) 0.31
Kyte-Doolittle Hydrophobicity Value 0.021
Molecular Weight (kDa) 23890.3
Isoelectric Point (pI) 7.11

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 89 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000946 (297 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4708
Search term: thioredoxin

Human Homologs

References

No references are associated with this feature.