Pseudomonas protegens Pf-5, PFL_4819

Gene Feature Overview

Strain	Pseudomonas protegens Pf-5 GCF_000012265.1|latest
Locus Tag	PFL_4819
Name
Replicon	chromosome
Genomic location	5561211 - 5562728 (+ strand)

Cross-References

RefSeq	YP_261900.1
GI	70732144
Entrez	3479230
INSDC	AAY94049.1
NCBI Locus Tag	PFL_4819
UniParc	UPI000054DDB7
UniProtKB Acc	Q4K783
UniProtKB ID	Q4K783_PSEF5
UniRef100	UniRef100_Q4K783
UniRef50	UniRef50_Q4K783
UniRef90	UniRef90_Q4K783

Product

Feature Type	CDS
Coding Frame	1
Product Name	EmrB/QacA family drug resistance transporter
Synonyms
Evidence for Translation
Charge (pH 7)	12.76
Kyte-Doolittle Hydrophobicity Value	0.700
Molecular Weight (kDa)	53836.6
Isoelectric Point (pI)	9.92

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 581 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000244 (488 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFL_4819 Search term: EmrB/QacA family drug resistance transporter

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000258436 major facilitator superfamily domain containing 9 [Source:HGNC Symbol;Acc:HGNC:28158] E-value: 3.3e-11 Percent Identity: 33.1

References