Pseudomonas protegens Pf-5, PFL_5395 (pcaG_2)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5395
Name
pcaG_2
Replicon chromosome
Genomic location 6165388 - 6165993 (- strand)

Cross-References

RefSeq YP_262463.1
GI 70732700
EC Number 1.13.11.3
Entrez 3479787
INSDC AAY94605.1
NCBI Locus Tag PFL_5395
UniParc UPI000054DFE7
UniProtKB Acc Q4K5M0
UniProtKB ID Q4K5M0_PSEF5
UniRef100 UniRef100_Q4K5M0
UniRef50 UniRef50_Q4K5M0
UniRef90 UniRef90_Q4K5M0

Product

Feature Type CDS
Coding Frame 1
Product Name
protocatechuate 3,4-dioxygenase subunit alpha
Synonyms
Evidence for Translation
Charge (pH 7) -8.17
Kyte-Doolittle Hydrophobicity Value -0.227
Molecular Weight (kDa) 22.3
Isoelectric Point (pI) 5.02

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 97 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000152 (447 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5395
Search term: pcaG_2

Human Homologs

References

No references are associated with this feature.