Pseudomonas protegens Pf-5, PFL_5511 (btuB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5511
Name
btuB
Replicon chromosome
Genomic location 6295504 - 6297396 (+ strand)

Cross-References

RefSeq YP_262579.2
GI 346643258
Entrez 3479899
INSDC AAY94717.2
NCBI Locus Tag PFL_5511
UniParc UPI00021A00FE
UniProtKB Acc Q4K5A4
UniProtKB ID Q4K5A4_PSEF5
UniRef100 UniRef100_Q4K5A4
UniRef50 UniRef50_Q3K659
UniRef90 UniRef90_Q4K5A4

Product

Feature Type CDS
Coding Frame 1
Product Name
TonB-dependent outermembrane B12 receptor
Synonyms
Evidence for Translation
Charge (pH 7) -8.86
Kyte-Doolittle Hydrophobicity Value -0.655
Molecular Weight (kDa) 71252.0
Isoelectric Point (pI) 5.45

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 340 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000897 (3061 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5511
Search term: btuB

Human Homologs

References

No references are associated with this feature.