Pseudomonas protegens Pf-5, PFL_5639

Gene Feature Overview

Strain	Pseudomonas protegens Pf-5 GCF_000012265.1|latest
Locus Tag	PFL_5639
Name
Replicon	chromosome
Genomic location	6422158 - 6423282 (- strand)

Cross-References

RefSeq	YP_262698.1
GI	70732927
EC Number	3.6.3.31
Entrez	3480014
INSDC	AAY94832.1
NCBI Locus Tag	PFL_5639
UniParc	UPI000054E0C8
UniProtKB Acc	Q4K4Y5
UniProtKB ID	Q4K4Y5_PSEF5
UniRef100	UniRef100_Q4K4Y5
UniRef50	UniRef50_B9KZG1
UniRef90	UniRef90_G8Q0B0

Product

Feature Type	CDS
Coding Frame	1
Product Name	polyamine ABC transporter ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7)	-2.43
Kyte-Doolittle Hydrophobicity Value	-0.118
Molecular Weight (kDa)	41.1
Isoelectric Point (pI)	6.59

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000586 (511 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFL_5639 Search term: polyamine ABC transporter ATP-binding protein

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000496956 ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45] E-value: 1.3e-20 Percent Identity: 31.6
Ensembl 110, assembly GRCh38.p14	ENSP00000352135 ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45] E-value: 1.3e-20 Percent Identity: 31.6
Ensembl 110, assembly GRCh38.p14	ENSP00000392983 ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45] E-value: 1.3e-20 Percent Identity: 31.6

References