Pseudomonas protegens Pf-5, PFL_5649 (ksgA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5649
Name
ksgA
Replicon chromosome
Genomic location 6435410 - 6436222 (+ strand)

Cross-References

RefSeq YP_262708.1
GI 70732937
EC Number 2.1.1.-
Entrez 3480024
INSDC AAY94842.1
NCBI Locus Tag PFL_5649
UniParc UPI000054E0D2
UniProtKB Acc Q4K4X5
UniProtKB ID RSMA_PSEF5
UniRef100 UniRef100_Q4K4X5
UniRef50 UniRef50_Q48NT7
UniRef90 UniRef90_Q4K4X5

Product

Feature Type CDS
Coding Frame 1
Product Name
dimethyladenosine transferase
Synonyms
Evidence for Translation
Charge (pH 7) 3.61
Kyte-Doolittle Hydrophobicity Value -0.232
Molecular Weight (kDa) 29807.0
Isoelectric Point (pI) 8.52

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 664 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000575 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5649
Search term: ksgA

Human Homologs

Ensembl 110, assembly GRCh38.p14
transcription factor B1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:17037]
E-value: 1.9e-34
Percent Identity: 34.3

References

No references are associated with this feature.