Pseudomonas protegens Pf-5, PFL_5791

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5791
Name
Replicon chromosome
Genomic location 6598674 - 6599123 (- strand)

Cross-References

RefSeq YP_262849.1
GI 70733076
Entrez 3480163
INSDC AAY94981.1
NCBI Locus Tag PFL_5791
UniParc UPI000054E15A
UniProtKB Acc Q4K4I4
UniProtKB ID Q4K4I4_PSEF5
UniRef100 UniRef100_Q4K4I4
UniRef50 UniRef50_Q4K4I4
UniRef90 UniRef90_Q4K4I4

Product

Feature Type CDS
Coding Frame 1
Product Name
cytochrome c'
Synonyms
Evidence for Translation
Charge (pH 7) 2.07
Kyte-Doolittle Hydrophobicity Value -0.381
Molecular Weight (kDa) 16.4
Isoelectric Point (pI) 7.99

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 35 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000525 (500 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5791
Search term: cytochrome c'

Human Homologs

References

No references are associated with this feature.