Pseudomonas protegens Pf-5, PFL_5826 (pilH)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5826
Name
pilH
Replicon chromosome
Genomic location 6637298 - 6637663 (- strand)

Cross-References

RefSeq YP_262884.1
GI 70733111
Entrez 3480198
INSDC AAY95016.1
NCBI Locus Tag PFL_5826
UniParc UPI000054E17D
UniProtKB Acc Q4K4E9
UniProtKB ID Q4K4E9_PSEF5
UniRef100 UniRef100_Q4K4E9
UniRef50 UniRef50_P43501
UniRef90 UniRef90_P43501

Product

Feature Type CDS
Coding Frame 1
Product Name
type IV pilus response regulator PilH
Synonyms
Evidence for Translation
Charge (pH 7) -5.29
Kyte-Doolittle Hydrophobicity Value -0.331
Molecular Weight (kDa) 13.3
Isoelectric Point (pI) 4.76

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 624 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000400 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5826
Search term: pilH

Human Homologs

References

No references are associated with this feature.