Pseudomonas protegens Pf-5, PFL_5840

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5840
Name
Replicon chromosome
Genomic location 6648613 - 6649203 (+ strand)

Cross-References

RefSeq YP_262898.1
GI 70733125
Entrez 3480212
INSDC AAY95030.1
NCBI Locus Tag PFL_5840
UniParc UPI000054E18B
UniProtKB Acc Q4K4D5
UniProtKB ID Q4K4D5_PSEF5
UniRef100 UniRef100_Q4K4D5
UniRef50 UniRef50_P25254
UniRef90 UniRef90_Q4K4D5

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 5.16
Kyte-Doolittle Hydrophobicity Value 1.137
Molecular Weight (kDa) 21.5
Isoelectric Point (pI) 9.97

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 277 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000383 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5840

Human Homologs

References

No references are associated with this feature.