Pseudomonas protegens Pf-5, PFL_5861

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5861
Name
Replicon chromosome
Genomic location 6666140 - 6667141 (+ strand)

Cross-References

RefSeq YP_262919.2
GI 346643298
Entrez 3480233
INSDC AAY95051.2
NCBI Locus Tag PFL_5861
UniParc UPI00021A00C8
UniProtKB Acc Q4K4B4
UniProtKB ID Q4K4B4_PSEF5
UniRef100 UniRef100_Q4K4B4
UniRef50 UniRef50_G8Q3N8
UniRef90 UniRef90_Q4K4B4

Product

Feature Type CDS
Coding Frame 1
Product Name
alpha/beta hydrolase
Synonyms
Evidence for Translation
Charge (pH 7) 3.54
Kyte-Doolittle Hydrophobicity Value -0.408
Molecular Weight (kDa) 36967.3
Isoelectric Point (pI) 7.87

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 186 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000359 (530 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5861

Human Homologs

Ensembl 110, assembly GRCh38.p14
abhydrolase domain containing 3, phospholipase [Source:HGNC Symbol;Acc:HGNC:18718]
E-value: 1.7e-35
Percent Identity: 28.6

References

No references are associated with this feature.