Strain |
Pseudomonas protegens Pf-5
GCF_000012265.1|latest |
Locus Tag |
PFL_6087
|
Name |
tssB
|
Replicon | chromosome |
Genomic location | 6914043 - 6914558 (+ strand) |
RefSeq | YP_263145.1 |
GI | 70733370 |
Entrez | 3480457 |
INSDC | AAY95275.1 |
NCBI Locus Tag | PFL_6087 |
UniParc | UPI000054E27E |
UniProtKB Acc | Q4K3N8 |
UniProtKB ID | Q4K3N8_PSEF5 |
UniRef100 | UniRef100_Q4K3N8 |
UniRef50 | UniRef50_Q4K3N8 |
UniRef90 | UniRef90_Q4K3N8 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
type VI secretion protein TssB
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | -4.76 |
Kyte-Doolittle Hydrophobicity Value | -0.202 |
Molecular Weight (kDa) | 18.7 |
Isoelectric Point (pI) | 4.73 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
5N8N | STRUCTURAL PROTEIN | 02/23/17 | Contracted sheath of a Pseudomonas aeruginosa type six secretion system consisting of TssB1 and TssC1 | Pseudomonas aeruginosa | 3.28 | ELECTRON MICROSCOPY | 94.6 |
4UQZ | PROTEIN TRANSPORT | 06/25/14 | Coevolution of the ATPase ClpV, the TssB-TssC Sheath and the Accessory HsiE Protein Distinguishes Two Type VI Secretion Classes | PSEUDOMONAS AERUGINOSA PAO1 | 1.599 | X-RAY DIFFRACTION | 93.4 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 106 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG000082 (1224 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PFL_6087
Search term: tssB
Search term: type VI secretion protein TssB
|