Strain |
Pseudomonas protegens Pf-5
GCF_000012265.1|latest |
Locus Tag |
PFL_6088
|
Name |
tssC
|
Replicon | chromosome |
Genomic location | 6914575 - 6916068 (+ strand) |
RefSeq | YP_263146.1 |
GI | 70733371 |
Entrez | 3480458 |
INSDC | AAY95276.1 |
NCBI Locus Tag | PFL_6088 |
UniParc | UPI000054E27F |
UniProtKB Acc | Q4K3N7 |
UniProtKB ID | Q4K3N7_PSEF5 |
UniRef100 | UniRef100_Q4K3N7 |
UniRef50 | UniRef50_Q4K3N7 |
UniRef90 | UniRef90_Q4K3N7 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
type VI secretion protein TssC
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | -12.27 |
Kyte-Doolittle Hydrophobicity Value | -0.438 |
Molecular Weight (kDa) | 55.6 |
Isoelectric Point (pI) | 5.28 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
5N8N | STRUCTURAL PROTEIN | 02/23/17 | Contracted sheath of a Pseudomonas aeruginosa type six secretion system consisting of TssB1 and TssC1 | Pseudomonas aeruginosa | 3.28 | ELECTRON MICROSCOPY | 93.7 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 111 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG000083 (1225 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PFL_6088
Search term: tssC
Search term: type VI secretion protein TssC
|