Pseudomonas protegens Pf-5, PFL_6125 (purK)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_6125
Name
purK
Replicon chromosome
Genomic location 6955067 - 6956149 (- strand)

Cross-References

RefSeq YP_263183.1
GI 70733408
EC Number 4.1.1.21
Entrez 3480495
INSDC AAY95313.1
NCBI Locus Tag PFL_6125
UniParc UPI000054E2A3
UniProtKB Acc Q4K3K0
UniProtKB ID Q4K3K0_PSEF5
UniRef100 UniRef100_Q4K3K0
UniRef50 UniRef50_P72158
UniRef90 UniRef90_Q4K3K0

Product

Feature Type CDS
Coding Frame 1
Product Name
phosphoribosylaminoimidazole carboxylase ATPase subunit
Synonyms
Evidence for Translation
Charge (pH 7) -12.25
Kyte-Doolittle Hydrophobicity Value 0.025
Molecular Weight (kDa) 38.8
Isoelectric Point (pI) 5.11

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 493 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004978 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_6125
Search term: purK

Human Homologs

References

No references are associated with this feature.