Pseudomonas protegens Pf-5, PFL_6164

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_6164
Name
Replicon chromosome
Genomic location 7002226 - 7003101 (+ strand)

Cross-References

RefSeq YP_263222.1
GI 70733447
Entrez 3480534
INSDC AAY95352.1
NCBI Locus Tag PFL_6164
UniParc UPI000054E2CA
UniProtKB Acc Q4K3G1
UniProtKB ID Q4K3G1_PSEF5
UniRef100 UniRef100_Q4K3G1
UniRef50 UniRef50_Q87U00
UniRef90 UniRef90_Q4K3G1

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 1.93
Kyte-Doolittle Hydrophobicity Value -0.127
Molecular Weight (kDa) 30945.9
Isoelectric Point (pI) 8.50

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 70 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005062 (516 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_6164

Human Homologs

References

No references are associated with this feature.