Pseudomonas protegens Pf-5, PFL_6199

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_6199
Name
Replicon chromosome
Genomic location 7038176 - 7038799 (+ strand)

Cross-References

RefSeq YP_263257.1
GI 70733482
Entrez 3480569
INSDC AAY95387.1
NCBI Locus Tag PFL_6199
UniParc UPI000054E2ED
UniProtKB Acc Q4K3C6
UniProtKB ID Q4K3C6_PSEF5
UniRef100 UniRef100_Q4K3C6
UniRef50 UniRef50_D8ITW6
UniRef90 UniRef90_Q4K3C6

Product

Feature Type CDS
Coding Frame 1
Product Name
acyltransferase domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7) 4.16
Kyte-Doolittle Hydrophobicity Value -0.120
Molecular Weight (kDa) 23.2
Isoelectric Point (pI) 9.45

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 241 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003032 (433 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_6199

Human Homologs

Ensembl 110, assembly GRCh38.p14
tafazzin, phospholipid-lysophospholipid transacylase [Source:HGNC Symbol;Acc:HGNC:11577]
E-value: 1.5e-05
Percent Identity: 29.4

References

No references are associated with this feature.