Pseudomonas protegens CHA0, PFLCHA0_c00120 (hdtS)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas protegens CHA0 - Assembly GCF_000397205.1
GCF_000397205.1|latest
Locus Tag
PFLCHA0_c00120
Name
hdtS
Replicon chromosome
Genomic location 13683 - 14477 (- strand)

Cross-References

RefSeq YP_007997323.1
GI 501677497
Entrez 15557928
NCBI Locus Tag PFLCHA0_c00120

Product

Feature Type CDS
Coding Frame 1
Product Name
putative acylhomoserine lactone synthase HdtS
Synonyms
Evidence for Translation
Charge (pH 7) 9.35
Kyte-Doolittle Hydrophobicity Value 0.172
Molecular Weight (kDa) 29493.2
Isoelectric Point (pI) 9.90

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 496 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000005 (538 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLCHA0_c00120
Search term: hdtS

Human Homologs

Ensembl 110, assembly GRCh38.p14
1-acylglycerol-3-phosphate O-acyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:325]
E-value: 9.5e-18
Percent Identity: 34.4

References

No references are associated with this feature.