Pseudomonas protegens CHA0, PFLCHA0_c01310

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas protegens CHA0 - Assembly GCF_000397205.1
GCF_000397205.1|latest
Locus Tag
PFLCHA0_c01310
Name
Replicon chromosome
Genomic location 137897 - 139843 (+ strand)

Cross-References

RefSeq YP_007997437.1
GI 501677611
Entrez 15558047
NCBI Locus Tag PFLCHA0_c01310

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -11.03
Kyte-Doolittle Hydrophobicity Value -0.036
Molecular Weight (kDa) 71785.5
Isoelectric Point (pI) 5.85

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
3PFM SIGNALING PROTEIN 10/28/10 Crystal structure of a EAL domain of GGDEF domain protein from Pseudomonas fluorescens Pf Pseudomonas fluorescens 2.908 X-RAY DIFFRACTION 99.6
3PJV LYASE 11/10/10 Structure of Pseudomonas fluorescence LapD periplasmic domain Pseudomonas fluorescens 1.7727 X-RAY DIFFRACTION 90.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 418 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001350 (454 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLCHA0_c01310

Human Homologs

References

No references are associated with this feature.