Pseudomonas protegens CHA0, PFLCHA0_c31340 (yliI)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas protegens CHA0 - Assembly GCF_000397205.1
GCF_000397205.1|latest
Locus Tag
PFLCHA0_c31340
Name
yliI
Replicon chromosome
Genomic location 3493190 - 3494341 (- strand)

Cross-References

RefSeq YP_008000408.1
GI 501680582
EC Number 1.1.5.-
Entrez 15561050
NCBI Locus Tag PFLCHA0_c31340

Product

Feature Type CDS
Coding Frame 1
Product Name
soluble aldose sugar dehydrogenase YliI
Synonyms
Evidence for Translation
Charge (pH 7) -2.86
Kyte-Doolittle Hydrophobicity Value -0.357
Molecular Weight (kDa) 41576.6
Isoelectric Point (pI) 6.43

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 324 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001072 (523 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLCHA0_c31340
Search term: yliI

Human Homologs

Ensembl 110, assembly GRCh38.p14
HHIP like 1 [Source:HGNC Symbol;Acc:HGNC:19710]
E-value: 6.6e-20
Percent Identity: 29.2
Ensembl 110, assembly GRCh38.p14
HHIP like 1 [Source:HGNC Symbol;Acc:HGNC:19710]
E-value: 6.6e-20
Percent Identity: 29.2

References

No references are associated with this feature.