Pseudomonas protegens CHA0, PFLCHA0_c43950 (msbA3)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas protegens CHA0 - Assembly GCF_000397205.1
GCF_000397205.1|latest
Locus Tag
PFLCHA0_c43950
Name
msbA3
Replicon chromosome
Genomic location 4979478 - 4981298 (- strand)

Cross-References

RefSeq YP_008001658.1
GI 501681832
EC Number 3.6.3.-
Entrez 15562311
NCBI Locus Tag PFLCHA0_c43950

Product

Feature Type CDS
Coding Frame 1
Product Name
lipid A export ATP-binding/permease protein MsbA
Synonyms
Evidence for Translation
Charge (pH 7) 4.57
Kyte-Doolittle Hydrophobicity Value 0.206
Molecular Weight (kDa) 66.3
Isoelectric Point (pI) 8.42

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000827 (524 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLCHA0_c43950
Search term: msbA3

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40]
E-value: 3.2e-53
Percent Identity: 31.2
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40]
E-value: 3.2e-53
Percent Identity: 31.2

References

No references are associated with this feature.