Pseudomonas protegens CHA0, PFLCHA0_c55970

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas protegens CHA0 - Assembly GCF_000397205.1
GCF_000397205.1|latest
Locus Tag
PFLCHA0_c55970
Name
Replicon chromosome
Genomic location 6221463 - 6222137 (- strand)

Cross-References

RefSeq YP_008002830.1
GI 501683004
Entrez 15563513
NCBI Locus Tag PFLCHA0_c55970

Product

Feature Type CDS
Coding Frame 1
Product Name
nucleotidyltransferase family protein
Synonyms
Evidence for Translation
Charge (pH 7) -1.67
Kyte-Doolittle Hydrophobicity Value 0.070
Molecular Weight (kDa) 24.2
Isoelectric Point (pI) 6.68

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 623 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000580 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLCHA0_c55970

Human Homologs

Ensembl 110, assembly GRCh38.p14
GDP-mannose pyrophosphorylase B [Source:HGNC Symbol;Acc:HGNC:22932]
E-value: 7.0e-22
Percent Identity: 32.0
Ensembl 110, assembly GRCh38.p14
GDP-mannose pyrophosphorylase B [Source:HGNC Symbol;Acc:HGNC:22932]
E-value: 7.0e-22
Percent Identity: 32.0
Ensembl 110, assembly GRCh38.p14
GDP-mannose pyrophosphorylase B [Source:HGNC Symbol;Acc:HGNC:22932]
E-value: 7.0e-22
Percent Identity: 32.0

References

No references are associated with this feature.