Pseudomonas protegens CHA0, PFLCHA0_c61700

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas protegens CHA0 - Assembly GCF_000397205.1
GCF_000397205.1|latest
Locus Tag
PFLCHA0_c61700
Name
Replicon chromosome
Genomic location 6842267 - 6843493 (+ strand)

Cross-References

RefSeq YP_008003402.1
GI 501683576
Entrez 15564087
NCBI Locus Tag PFLCHA0_c61700

Product

Feature Type CDS
Coding Frame 1
Product Name
Rhs family protein
Synonyms
Evidence for Translation
Charge (pH 7) -2.62
Kyte-Doolittle Hydrophobicity Value 0.345
Molecular Weight (kDa) 41.7
Isoelectric Point (pI) 6.26

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
6B12 ANTIMICROBIAL PROTEIN 09/15/17 Structure of Tne2 in complex with Tni2 Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5) 1.71 X-RAY DIFFRACTION 100.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 30 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000092 (1670 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLCHA0_c61700

Human Homologs

References

No references are associated with this feature.