Pseudomonas poae RE_1-1-14, H045_02245 (rnc)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas poae RE*1-1-14
GCF_000336465.1|latest
Locus Tag
H045_02245
Name
rnc
Replicon chromosome
Genomic location 484238 - 484927 (+ strand)

Cross-References

RefSeq YP_007396021.1
GI 447915453
EC Number 3.1.26.3
Entrez 14502253
INSDC AGE24525.1
NCBI Locus Tag H045_02245
UniParc UPI00025E93E2
UniProtKB Acc M4K1I3
UniProtKB ID M4K1I3_9PSED
UniRef100 UniRef100_I2BSF6
UniRef50 UniRef50_Q4KHT1
UniRef90 UniRef90_C3K6Y7

Product

Feature Type CDS
Coding Frame 1
Product Name
ribonuclease III
Synonyms
Evidence for Translation
Charge (pH 7) -3.36
Kyte-Doolittle Hydrophobicity Value -0.136
Molecular Weight (kDa) 25.4
Isoelectric Point (pI) 5.47

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 589 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000744 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H045_02245
Search term: rnc
Search term: ribonuclease III

Human Homologs

Ensembl 110, assembly GRCh38.p14
drosha ribonuclease III [Source:HGNC Symbol;Acc:HGNC:17904]
E-value: 1.4e-17
Percent Identity: 31.9
Ensembl 110, assembly GRCh38.p14
drosha ribonuclease III [Source:HGNC Symbol;Acc:HGNC:17904]
E-value: 1.4e-17
Percent Identity: 31.9
Ensembl 110, assembly GRCh38.p14
drosha ribonuclease III [Source:HGNC Symbol;Acc:HGNC:17904]
E-value: 1.4e-17
Percent Identity: 31.9

References

No references are associated with this feature.