Pseudomonas poae RE_1-1-14, H045_03900

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas poae RE*1-1-14
GCF_000336465.1|latest
Locus Tag
H045_03900
Name
Replicon chromosome
Genomic location 840318 - 841610 (- strand)

Cross-References

RefSeq YP_007396352.1
GI 447915784
Entrez 14502584
NCBI Locus Tag H045_03900

Product

Feature Type CDS
Coding Frame 1
Product Name
outer membrane porin, OprD family protein
Synonyms
Evidence for Translation
Charge (pH 7) 1.69
Kyte-Doolittle Hydrophobicity Value -0.442
Molecular Weight (kDa) 47230.3
Isoelectric Point (pI) 7.87

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 24 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000729 (839 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H045_03900

Human Homologs

References

No references are associated with this feature.