Pseudomonas poae RE_1-1-14, H045_04255

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas poae RE*1-1-14
GCF_000336465.1|latest
Locus Tag
H045_04255
Name
Replicon chromosome
Genomic location 910150 - 911907 (+ strand)

Cross-References

RefSeq YP_007396423.1
GI 447915855
Entrez 14502655
INSDC AGE24927.1
NCBI Locus Tag H045_04255
UniParc UPI0002A7902B
UniProtKB Acc M4K035
UniProtKB ID M4K035_9PSED
UniRef100 UniRef100_M4K035
UniRef50 UniRef50_Q48A62
UniRef90 UniRef90_C3K608

Product

Feature Type CDS
Coding Frame 1
Product Name
ABC transporter permease
Synonyms
Evidence for Translation
Charge (pH 7) 10.13
Kyte-Doolittle Hydrophobicity Value 0.257
Molecular Weight (kDa) 63.7
Isoelectric Point (pI) 9.91

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001073 (497 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H045_04255

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 9 [Source:HGNC Symbol;Acc:HGNC:50]
E-value: 1.7e-88
Percent Identity: 35.1
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 9 [Source:HGNC Symbol;Acc:HGNC:50]
E-value: 1.7e-88
Percent Identity: 35.1
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 9 [Source:HGNC Symbol;Acc:HGNC:50]
E-value: 1.7e-88
Percent Identity: 35.1

References

No references are associated with this feature.