Pseudomonas poae RE_1-1-14, H045_08125

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas poae RE*1-1-14
GCF_000336465.1|latest
Locus Tag
H045_08125
Name
Replicon chromosome
Genomic location 1807285 - 1808268 (+ strand)

Cross-References

RefSeq YP_007397191.1
GI 447916623
Entrez 14503423
INSDC AGE25695.1
NCBI Locus Tag H045_08125
UniParc UPI0002AF4B18
UniProtKB Acc M4K4Z3
UniProtKB ID M4K4Z3_9PSED
UniRef100 UniRef100_M4K4Z3
UniRef50 UniRef50_K0WF17
UniRef90 UniRef90_V9QXL6

Product

Feature Type CDS
Coding Frame 1
Product Name
AraC family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 1.02
Kyte-Doolittle Hydrophobicity Value -0.109
Molecular Weight (kDa) 36597.6
Isoelectric Point (pI) 7.27

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 391 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001516 (480 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H045_08125

Human Homologs

References

No references are associated with this feature.