Pseudomonas poae RE_1-1-14, H045_15485

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas poae RE*1-1-14
GCF_000336465.1|latest
Locus Tag
H045_15485
Name
Replicon chromosome
Genomic location 3535899 - 3536501 (+ strand)

Cross-References

RefSeq YP_007398658.1
GI 447918090
Entrez 14504890
INSDC AGE27162.1
NCBI Locus Tag H045_15485
UniParc UPI0002A7B341
UniProtKB Acc M4K6D5
UniProtKB ID M4K6D5_9PSED
UniRef100 UniRef100_M4K6D5
UniRef50 UniRef50_C3JYT6
UniRef90 UniRef90_I2BMJ9

Product

Feature Type CDS
Coding Frame 1
Product Name
cold-shock DNA-binding domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7) 3.67
Kyte-Doolittle Hydrophobicity Value 0.396
Molecular Weight (kDa) 22.0
Isoelectric Point (pI) 9.45

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 488 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000926 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H045_15485

Human Homologs

References

No references are associated with this feature.