Pseudomonas poae RE_1-1-14, H045_20430

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas poae RE*1-1-14
GCF_000336465.1|latest
Locus Tag
H045_20430
Name
Replicon chromosome
Genomic location 4635770 - 4637629 (+ strand)

Cross-References

RefSeq YP_007399644.1
GI 447919076
Entrez 14505876
INSDC AGE28148.1
NCBI Locus Tag H045_20430
UniParc UPI0002AF4781
UniProtKB Acc M4K4V5
UniProtKB ID M4K4V5_9PSED
UniRef100 UniRef100_M4K4V5
UniRef50 UniRef50_Q4K3N4
UniRef90 UniRef90_Q4K3N4

Product

Feature Type CDS
Coding Frame 1
Product Name
type VI secretion protein TssF
Synonyms
Evidence for Translation
Charge (pH 7) 2.39
Kyte-Doolittle Hydrophobicity Value -0.269
Molecular Weight (kDa) 69233.0
Isoelectric Point (pI) 7.40

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 104 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000087 (1217 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H045_20430

Human Homologs

References

No references are associated with this feature.