Pseudomonas poae RE_1-1-14, H045_20730

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas poae RE*1-1-14
GCF_000336465.1|latest
Locus Tag
H045_20730
Name
Replicon chromosome
Genomic location 4705220 - 4706086 (- strand)

Cross-References

RefSeq YP_007399704.1
GI 447919136
Entrez 14505936
INSDC AGE28208.1
NCBI Locus Tag H045_20730
UniParc UPI00019DADC7
UniProtKB Acc M4K516
UniProtKB ID M4K516_9PSED
UniRef100 UniRef100_A0A0D0TK91
UniRef50 UniRef50_C1DH57
UniRef90 UniRef90_Q4K3G5

Product

Feature Type CDS
Coding Frame 1
Product Name
transcriptional regulator, RpiR family/SIS domain protein
Synonyms
Evidence for Translation
Charge (pH 7) 1.76
Kyte-Doolittle Hydrophobicity Value 0.166
Molecular Weight (kDa) 31.1
Isoelectric Point (pI) 7.40

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 225 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004989 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H045_20730

Human Homologs

References

No references are associated with this feature.