Pseudomonas poae RE_1-1-14, H045_21205 (def)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas poae RE*1-1-14
GCF_000336465.1|latest
Locus Tag
H045_21205
Name
def
Replicon chromosome
Genomic location 4812337 - 4812843 (- strand)

Cross-References

RefSeq YP_007399799.1
GI 447919231
EC Number 3.5.1.88
Entrez 14506031
INSDC AGE28303.1
NCBI Locus Tag H045_21205
UniParc UPI0002A7B109
UniProtKB Acc M4K5B7
UniProtKB ID M4K5B7_9PSED
UniRef100 UniRef100_M4K5B7
UniRef50 UniRef50_Q9KVU3
UniRef90 UniRef90_I2BLG3

Product

Feature Type CDS
Coding Frame 1
Product Name
peptide deformylase
Synonyms
Evidence for Translation
Charge (pH 7) -5.13
Kyte-Doolittle Hydrophobicity Value -0.317
Molecular Weight (kDa) 19.3
Isoelectric Point (pI) 5.14

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 587 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000019 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H045_21205
Search term: def

Human Homologs

References

No references are associated with this feature.