Pseudomonas denitrificans ATCC 13867, H681_17720

Gene Feature Overview

Strain	Pseudomonas denitrificans ATCC 13867 GCF_000349845.1|latest
Locus Tag	H681_17720
Name
Replicon	chromosome
Genomic location	3996059 - 3996937 (- strand)

Cross-References

RefSeq	YP_007658951.1
GI	472326705
EC Number	4.2.1.52
Entrez	14997669
INSDC	AGI25411.1
NCBI Locus Tag	H681_17720
UniParc	UPI0002C4F790
UniProtKB Acc	M4X1J1
UniProtKB ID	M4X1J1_PSEDE
UniRef100	UniRef100_M4X1J1
UniRef50	UniRef50_Q9JZR4
UniRef90	UniRef90_Q9I4W3

Product

Feature Type	CDS
Coding Frame	1
Product Name	dihydrodipicolinate synthase
Synonyms
Evidence for Translation
Charge (pH 7)	-4.43
Kyte-Doolittle Hydrophobicity Value	0.014
Molecular Weight (kDa)	31445.9
Isoelectric Point (pI)	5.91

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession	Header	Accession Date	Compound	Source	Resolution	Method	Percent Identity
3PS7	LYASE	12/01/10	Biochemical studies and crystal structure determination of dihydrodipicolinate synthase from Pseudomonas aeruginosa	Pseudomonas aeruginosa	2.85	X-RAY DIFFRACTION	92.8
3PUO	LYASE	12/06/10	Crystal structure of dihydrodipicolinate synthase from Pseudomonas aeruginosa(PsDHDPS)complexed with L-lysine at 2.65A resolution	Pseudomonas aeruginosa	2.65	X-RAY DIFFRACTION	92.8
3S8H	LYASE	05/28/11	Structure of dihydrodipicolinate synthase complexed with 3-Hydroxypropanoic acid(HPA)at 2.70 A resolution	Pseudomonas aeruginosa	2.7	X-RAY DIFFRACTION	92.8
3QZE	LYASE	03/05/11	Crystal Structure of DapA (PA1010) at 1.6 A resolution	Pseudomonas aeruginosa	1.59	X-RAY DIFFRACTION	94.2
3NOE	LYASE	06/25/10	Crystal Structure of Dihydrodipicolinate synthase from Pseudomonas aeruginosa	Pseudomonas aeruginosa	2.95	X-RAY DIFFRACTION	92.8
6P90	STRUCTURAL PROTEIN	06/08/19	Crystal structure of PaDHDPS2-H56Q mutant	Pseudomonas aeruginosa	1.9	X-RAY DIFFRACTION	93.8

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 633 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000973 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: H681_17720 Search term: dihydrodipicolinate synthase

Human Homologs

References