Pseudomonas denitrificans ATCC 13867, H681_18115

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas denitrificans ATCC 13867
GCF_000349845.1|latest
Locus Tag
H681_18115
Name
Replicon chromosome
Genomic location 4066788 - 4067615 (- strand)

Cross-References

RefSeq YP_007659030.1
GI 472326784
Entrez 14997748
INSDC AGI25490.1
NCBI Locus Tag H681_18115
UniParc UPI0002C4E251
UniProtKB Acc M4XJN4
UniProtKB ID M4XJN4_PSEDE
UniRef100 UniRef100_M4XJN4
UniRef50 UniRef50_Q16A99
UniRef90 UniRef90_A4XWK1

Product

Feature Type CDS
Coding Frame 1
Product Name
tRNA 2-thiocytidine biosynthesis protein TtcA
Synonyms
Evidence for Translation
Charge (pH 7) -3.22
Kyte-Doolittle Hydrophobicity Value -0.236
Molecular Weight (kDa) 31346.9
Isoelectric Point (pI) 5.77

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 413 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001150 (540 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H681_18115

Human Homologs

References

No references are associated with this feature.